Kinetic Model App for Drug Development and Discovery

Step 1 of 2: Data Entry

Use this app to help you find better kinetic models. Enter the raw data below and click:
Rawa Data: S 0 0.33 6.66 21 45 100 450 800 3333 21000 57.28305 45.69467234 40.75053 55.46994 79.89796 100.5862 132.81628 115.37992 47.3933 1.58413 -0.88168 134.28305 114.7994964 120.40719 129.85964 144.06482 163.85718 181.78074 122.49833 61.63376 8.82756 -0.44512 103.28305 83.02982758 90.57182 97.6393 122.63963 134.98473 164.28678 100.08158 32.50751 2.79073 -0.63528 67.28305 52.5034317 50.71479 72.62562 83.1039 107.65851 144.29605 121.13715 48.76946 -2.62811 -0.8324 42.28305 36.50214913 31.7827 51.57802 72.6319 94.22112 132.20392 110.82363 46.15475 1.35775 -0.92603 842.28305 86.09743151 86.28995 78.72409 60.97284 56.07159 43.87458 24.08003 19.3098 7.54598 2.8286 642.28305 131.5128067 138.7629 125.51355 105.94966 92.34408 71.09809 30.90458 14.56787 7.41628 0.93133 442.28305 195.9365442 188.74142 179.15309 153.3945 131.99813 90 43.09278 21.11111 6.70912 0.58681 292.28305 218.9168079 229.29977 229.13182 189.70226 172.07653 159.93367 44.77098 23.77168 3.37416 1.72046 197.28305 175.6762906 170.17813 174.54976 181.13728 191.38543 156.61276 70.77297 40.65154 0.53158 0.21576	New model: K1 = 177.76 Hx1 = 1.0241 Hx2 = 2.6873 K1is = 29.516 K1ii = 34.05 V1 = 20.056 Kx1 = 30.184 Kx2 = 553.64 V1is = 451.78 V1ii = 0 K2 = 225.49 H1 = 1.7135 H2 = 2.686 K3 = 605.01 V2 = 443.68 Hxx = 0.9611 Kxx1 = 70.929 V2i = 0 K2i = 118.41 K2term = (K2)-((K2-K2i)((I^Hxx)/((I^Hxx)+(Kxx1^Hxx)))) V2term = (V2)-((V2-V2i)((I^Hxx)/((I^Hxx)+(Kxx1^Hxx)))) V1term = (V1)-(V1-V1is)(I^Hx1/(I^Hx1+Kx1^Hx1))+(V1-V1is)(I^Hx2/(I^Hx2+Kx2^Hx2))-(V1-V1ii)(I^Hx2/(I^Hx2+Kx2^Hx2)) K1term = (K1)-(K1-K1is)(I^Hx1/(I^Hx1+Kx1^Hx1))+(K1-K1is)(I^Hx2/(I^Hx2+Kx2^Hx2))-(K1-K1ii)(I^Hx2/(I^Hx2+Kx2^Hx2)) v = (V1term)(S/(S+K1term))-(V1term)((S^H1)/(S^H1+K2term^H1))+(V2term)((S^H1)/(S^H1+K2term^H1))-(V2term)((S^H2)/(S^H2+K3^H2))	Baseline model: Vm1 = 240.1674 Ksi = 622.1714413 Vm2 = 39.08394108 Kii = 112.1452173 Kia = 19.21532676 Ksi = 624.1714413 K0.5s = 283.4096801 v = (Vm1S(1/(1+S/Ksi))(1/(1+I/Kii)) + Vm2S(1/(1+I/Kii))(1/(1+I/Kia)))/(S(1/(1+S/Ksi))+K0.5s(1/(1+I/Kii))*(1/(1+I/Kia+I/Ksi)))

Some general notes:

For a description of how to use this app, see this blog entry titled: ...

For the raw data:
• First column = substrate (S) value
• First row = inhibitor ([I]) values, mapped to the x-axis
• Subsequent rows = observed concentration values, mapped to the y-axis; each row becomes 1 curve

This app is based on Ryan Walsh's paper on kinetic models.
Created by The Blue Factor, 2014.